Bulletin of Botanical Research ›› 2022, Vol. 42 ›› Issue (5): 811-820.doi: 10.7525/j.issn.1673-5102.2022.05.012
• Molecular biology • Previous Articles Next Articles
Mingyang LIU1, Huaxing XIAO1, Lifeng WANG2, Xiaoxu LIANG1, Yu ZHANG1, Meng WANG1()
Received:
2021-05-07
Online:
2022-09-20
Published:
2022-09-15
Contact:
Meng WANG
E-mail:wangmeng@hainanu.edu.cn
About author:
LIU Mingyang(1996—),female,master,mainly engaged in the research on plant molecular pathology.
Supported by:
CLC Number:
Mingyang LIU, Huaxing XIAO, Lifeng WANG, Xiaoxu LIANG, Yu ZHANG, Meng WANG. Cloning and Functional Analysis of Heat Shock Protein HbHSP90.8-1 from Hevea brasiliensis Müll. Arg.[J]. Bulletin of Botanical Research, 2022, 42(5): 811-820.
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URL: http://bbr.nefu.edu.cn/EN/10.7525/j.issn.1673-5102.2022.05.012
Table 1
Bioinformatics online analysis tool
名称 Name | 网址 Website |
---|---|
NCBI ORF Finder | www.ncbi.nlm.nih.gov/orffinder/ |
ExPASy ProtParam tool | web.expasy.org/protparam/ |
TMHMM Server v.2.0 | www.cbs.dtu.dk/services/TMHMM-2.0/ |
DeepLoc1.0 | www.cbs.dtu.dk/services/DeepLoc/ |
SignalP-5.0 Server | http://www.cbs.dtu.dk/services/SignalP/ |
SWISS-MODEL | swissmodel.expasy.org/ |
SOPMA | https://npsa-prabi.ibcp.fr/cgi-bin/secpred_sopma.pl |
NCBI smart BLAST | blast.ncbi.nlm.nih.gov/Blast.cgi |
MEME | meme-suite.org/tools/meme |
Fig.4
Phylogenetic tree analysis and subcellular localization prediction of HbHSP90.8-1A.Phylogenetic tree analysis of HbHSP90.8-1 protein with other species HSP90 proteins;GmHSP90(Glycine max,XP_003545030.1);ApHSP90 (Abrus precatorius,XP_027368246.1);PaHSP90(Populus alba,XP_034931576.1);RrHSP90(Rhamnella rubrinervis,KAF3446793.1);VvHSP90 (Vitis vinifera,XP_002273785.1);HiHSP90(Handroanthus impetiginosus,PIN15193.1);AtHSP90(Arabidopsis thaliana,NP_194150.1);AyHSP90(Acer yangbiense,TXG52042.1);SbHSP90(Salix brachista, KAB5557693.1);PeHSP90(Populus euphratica,XP_011045067.1);PtHSP90 (Populus trichocarpa,XP_002307732.1);RcHSP90(Ricinus communis,XP_002510550.1);MeHSP90(Manihot esculenta,XP_021601014.1) ;JcHSP90(Jatropha curcas,KDP36908.1);HbHSP90.8-1B.Prediction of HbHSP90.8-1 subcellular localization
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