Bulletin of Botanical Research ›› 2022, Vol. 42 ›› Issue (5): 811-820.doi: 10.7525/j.issn.1673-5102.2022.05.012
• Molecular biology • Previous Articles Next Articles
Mingyang LIU1, Huaxing XIAO1, Lifeng WANG2, Xiaoxu LIANG1, Yu ZHANG1, Meng WANG1()
Received:
2021-05-07
Online:
2022-09-20
Published:
2022-09-15
Contact:
Meng WANG
E-mail:wangmeng@hainanu.edu.cn
About author:
LIU Mingyang(1996—),female,master,mainly engaged in the research on plant molecular pathology.
Supported by:
CLC Number:
Mingyang LIU, Huaxing XIAO, Lifeng WANG, Xiaoxu LIANG, Yu ZHANG, Meng WANG. Cloning and Functional Analysis of Heat Shock Protein HbHSP90.8-1 from Hevea brasiliensis Müll. Arg.[J]. Bulletin of Botanical Research, 2022, 42(5): 811-820.
Add to citation manager EndNote|Ris|BibTeX
URL: https://bbr.nefu.edu.cn/EN/10.7525/j.issn.1673-5102.2022.05.012
Table 1
Bioinformatics online analysis tool
名称 Name | 网址 Website |
---|---|
NCBI ORF Finder | www.ncbi.nlm.nih.gov/orffinder/ |
ExPASy ProtParam tool | web.expasy.org/protparam/ |
TMHMM Server v.2.0 | www.cbs.dtu.dk/services/TMHMM-2.0/ |
DeepLoc1.0 | www.cbs.dtu.dk/services/DeepLoc/ |
SignalP-5.0 Server | http://www.cbs.dtu.dk/services/SignalP/ |
SWISS-MODEL | swissmodel.expasy.org/ |
SOPMA | https://npsa-prabi.ibcp.fr/cgi-bin/secpred_sopma.pl |
NCBI smart BLAST | blast.ncbi.nlm.nih.gov/Blast.cgi |
MEME | meme-suite.org/tools/meme |
Fig.4
Phylogenetic tree analysis and subcellular localization prediction of HbHSP90.8-1A.Phylogenetic tree analysis of HbHSP90.8-1 protein with other species HSP90 proteins;GmHSP90(Glycine max,XP_003545030.1);ApHSP90 (Abrus precatorius,XP_027368246.1);PaHSP90(Populus alba,XP_034931576.1);RrHSP90(Rhamnella rubrinervis,KAF3446793.1);VvHSP90 (Vitis vinifera,XP_002273785.1);HiHSP90(Handroanthus impetiginosus,PIN15193.1);AtHSP90(Arabidopsis thaliana,NP_194150.1);AyHSP90(Acer yangbiense,TXG52042.1);SbHSP90(Salix brachista, KAB5557693.1);PeHSP90(Populus euphratica,XP_011045067.1);PtHSP90 (Populus trichocarpa,XP_002307732.1);RcHSP90(Ricinus communis,XP_002510550.1);MeHSP90(Manihot esculenta,XP_021601014.1) ;JcHSP90(Jatropha curcas,KDP36908.1);HbHSP90.8-1B.Prediction of HbHSP90.8-1 subcellular localization
1 | ZHANG M, SHEN Z W, MENG G Q,et al.Genome-wide analysis of the Brachypodium distachyon(L.) P.Beauv.Hsp90 gene family reveals molecular evolution and expression profiling under drought and salt stresses[J].PLoS One,2017,12(12):e189187. |
2 | LACHOWIEC J, LEMUS T, BORENSTEIN E,et al.Hsp90 promotes kinase evolution[J].Molecular Biology and Evolution,2015,32(1):91-99. |
3 | ZUEHLKE A, JOHNSON J L.Hsp90 and co-chaperones twist the functions of diverse client proteins[J].Biopolymers,2010,93(3):211-217. |
4 | WATANABE E, MANO S, HARA-NISHIMURA I,et al.HSP90 stabilizes auxin receptor TIR1 and ensures plasticity of auxin responses[J].Plant Signaling & Behavior,2017,12(5):e1311439. |
5 | LOPEZ V A, PARK B C, NOWAK D,et al.A bacterial effector mimics a host HSP90 client to undermine immunity[J].Cell,2019,179(1):205-218.e21. |
6 | YUAN M H, JIANG Z Y, BI G Z,et al.Pattern-recognition receptors are required for NLR-mediated plant immunity[J].Nature,2021,592(7852):105-109. |
7 | MUSKETT P R, KAHN K, AUSTIN M J,et al.Arabidopsis RAR1 exerts rate-limiting control of R gene–mediated defenses against multiple pathogens[J].The Plant Cell,2002,14(5):979-992. |
8 | BIERI S, MAUCH S, SHEN Q H,et al.RAR1 positively controls steady state levels of barley MLA resistance proteins and enables sufficient MLA6 accumulation for effective resistance[J].The Plant Cell,2004,16(12):3480-3495. |
9 | LI Y Z, LI S X, BI D L,et al.SRFR1 negatively regulates plant NB-LRR resistance protein accumulation to prevent autoimmunity[J].PLoS Pathogens,2010,6(9):e1001111. |
10 | LIU Y L, BURCH-SMITH T, SCHIFF M,et al.Molecular chaperone Hsp90 associates with resistance protein N and its signaling proteins SGT1 and Rar1 to modulate an innate immune response in plants[J].Journal of Biological Chemistry,2004,279(3):2101-2108. |
11 | PIAZ F D, MALAFRONTE N, ROMANO A,et al.Structural characterization of tetranortriterpenes from Pseudrocedrela kotschyi and Trichilia emetica and study of their activity towards the chaperone Hsp90[J].Phytochemistry,2012,75:78-89. |
12 | PEI H C, SUN Q X, HAO Q Q,et al.The HSP90-RAR1-SGT1 based protein interactome in barley and stripe rust[J].Physiological and Molecular Plant Pathology,2015,91:11-19. |
13 | QIAN L C, ZHAO J P, DU Y M,et al.Hsp90 interacts with Tm-22 and is essential for Tm-22-mediated resistance to Tobacco mosaic virus[J].Frontiers in Plant Science,2018,9:411. |
14 | MOSHE A, GOROVITS R, LIU Y L,et al.Tomato plant cell death induced by inhibition of HSP90 is alleviated by Tomato yellow leaf curl virus infection[J].Molecular Plant Pathology,2016,17(2):247-260. |
15 | HUANG S, MONAGHAN J, ZHONG X H,et al.HSP90s are required for NLR immune receptor accumulation in Arabidopsis [J].The Plant Journal,2014,79(3):427-439. |
16 | 李一萍,茶正早,王大鹏.基于科学计量的天然橡胶学科领域前沿热点分析[J].热带作物学报,2020,41(12):2571-2581. |
LI Y P, CHA Z Z, WANG D P.Analysis on subject domain of fronts and hotspots in natural rubber by scientometrics[J].Chinese Journal of Tropical Crops,2020,41(12):2571-2581. | |
17 | PORNSURIYA C, CHAIRIN T, THAOCHAN N,et al.Identification and characterization of Neopestalotiopsis fungi associated with a novel leaf fall disease of rubber trees(Hevea brasiliensis) in Thailand[J].Journal of Phytopathology,2020,168(7/8):416-427. |
18 | 白蕤,李宁,陈汇林,等.大气环流指数和地面气象要素对海南省橡胶树白粉病的影响[J].植物保护学报,2019,46(4):770-778. |
BAI R, LI N, CHEN H L,et al.Influences of atmospheric circulation index and surface meteorological elements on the rubber tree powdery mildew in Hainan Province[J].Journal of Plant Protection,2019,46(4):770-778. | |
19 | ZHAI D L, WANG J, THALER P,et al.Contrasted effects of temperature during defoliation vs.refoliation periods on the infection of rubber powdery mildew(Oidium heveae) in Xishuangbanna,China[J].International Journal of Biometeorology,2020,64(11):1835-1845. |
20 | 曹学仁,车海彦,罗大全.海南橡胶树白粉菌的群体遗传结构研究[J].植物保护,2019,45(2):121-124. |
CAO X R, CHE H Y, LUO D Q.Population genetic structure of Oidium heveae from rubber tree in Hainan Province[J].Plant Protection,2019,45(2):121-124. | |
21 | CAO X R, XU X M, CHE H Y,et al.Effects of temperature and leaf age on conidial germination and disease development of powdery mildew on rubber tree[J].Plant Pathology,2021,70(2):484-491. |
22 | YIN H Y, FANG X J, LI P H,et al.Genetic mapping of a novel powdery mildew resistance gene in wild emmer wheat from “Evolution Canyon” in Mt.Carmel Israel[J].Theoretical and Applied Genetics,2021,134(3):909-921. |
23 | SCHMITTGEN T D, LIVAK K J.Analyzing real-time PCR data by the comparative CT method[J].Nature Protocols,2008,3(6):1101-1108. |
24 | 王芳,陆志民,王君,等.低温胁迫下红松与西伯利亚红松光合与气孔特性[J].植物研究,2021,41(2): 205-212. |
WANG F, LU Z M, WANG J,et al.Photosynthetic and stomatal characteristics of Pinus koraiensis and P.sibirica under low temperature stress[J].Bulletin of Botanical Research,2021,41(2): 205-212. | |
25 | 李海霞,李正华,邢亚娟.大兴安岭16种功能性植物叶片营养成分分析[J].森林工程,2019,35(1):29-35,86. |
LI H X, LI Z H, XING Y J.Analysis on nutrients component of sixteen functional plants leaves in Daxing’an Mountains full text replacement[J].Forest Engineering,2019,35(1):29-35,86. | |
26 | LING S P, SU S S, ZHANG H M,et al.Molecular cloning and characterization of the full-length Hsp90 gene from Matricaria recutita [J].Genetics and Molecular Research,2014,13(4):10994-11003. |
27 | TAKAHASHI A, CASAIS C, ICHIMURA K,et al.HSP90 interacts with RAR1 and SGT1 and is essential for RPS2-mediated disease resistance in Arabidopsis [J].Proceedings of the National Academy of Sciences of the United States of America,2003,100(20):11777-11782. |
28 | ZHANG M H, KADOTA Y, PRODROMOU C,et al.Structural basis for assembly of Hsp90-Sgt1-CHORD protein complexes:implications for chaperoning of NLR innate immunity receptors[J].Molecular Cell,2010,39(2):269-281. |
29 | ZHANG J, LI J B, LIU B B,et al.Genome-wide analysis of the Populus Hsp90 gene family reveals differential expression patterns,localization,and heat stress responses[J].BMC Genomics,2013,14(1):532. |
30 | 刘云飞,万红建,杨悦俭,等.番茄热激蛋白90的全基因组鉴定及分析[J].遗传,2014(10):1043-1052. |
LIU Y F, WAN H J, YANG Y J,et al.Genome-wide identification and analysis of heat shock protein 90 in tomato[J].Hereditas,2014(10):1043-1052. | |
31 | 王静,谭放军,梁成亮,等.辣椒热激蛋白HSP90家族基因鉴定及分析[J].园艺学报,2020,47(4):665-674. |
WANG J, TAN F J, LIANG C L,et al.Genome-wide identification and analysis of HSP90 gene family in pepper[J].Acta Horticulturae Sinica,2020,47(4):665-674. | |
32 | WANG T, LI J X, SHEN Q H.Regulation of NLR stability in plant immunity[J].Frontiers of Agricultural Science and Engineering,2019,6(2):97-104. |
33 | SHEN Q H, ZHOU F S, BIERI S,et al.Recognition specificity and RAR1/SGT1 dependence in barley Mla disease resistance genes to the powdery mildew fungus[J].The Plant Cell,2003,15(3):732-744. |
34 | HEIN I, BARCISZEWSKA-PACAK M, HRUBIKOVA K,et al.Virus-induced gene silencing-based functional characterization of genes associated with powdery mildew resistance in barley[J].Plant Physiology,2005,138(4):2155-2164. |
35 | 戎伟,梅双双.SGT1正调控橡胶树白粉菌在拟南芥上激活的抗病性[J].广东农业科学,2016,43(10):112-116. |
RONG W, MEI S S.Positive regulation effect of SGT1 on disease resistance triggered by Oidium heveae in Arabidopsis [J].Guangdong Agricultural Sciences,2016,43(10):112-116. | |
36 | 肖化兴,王立丰,王萌.橡胶树逆境胁迫响应基因HbHSP 90.1的结构与功能分析[J].分子植物育种,2019,17(16):5230-5237. |
XIAO H X, WANG L F, WANG M.Structure and function analysis of Hevea brasiliensis stress response gene HbHSP90.1 [J].Molecular Plant Breeding,2019,17(16):5230-5237. | |
37 | LI N, HAN X, FENG D,et al.Signaling crosstalk between salicylic acid and ethylene/jasmonate in plant defense:do we understand what they are whispering?[J].International Journal of Molecular Sciences,2019,20(3):671. |
38 | GUO W L, CHEN B H, GUO Y Y,et al.Improved powdery mildew resistance of transgenic Nicotiana benthamiana overexpressing the Cucurbita moschata CmSGT1 gene[J].Frontiers in Plant Science,2019,10:955. |
39 | 王彬,陈敏氡,林珲,等.中国南瓜CmHSP90基因的克隆及其在逆境胁迫下的表达分析[J].中国细胞生物学学报,2019,41(12):2332-2341. |
WANG B, CHEN M D, LIN H,et al.Cloning of CmHSP90 gene in Cucurbita moschata and its expression analysis under several adversity stresses[J].Chinese Journal of Cell Biology,2019,41(12):2332-2341. | |
40 | YU Y W, WANG J, LI S H,et al.Ascorbic acid integrates the antagonistic modulation of ethylene and abscisic acid in the accumulation of reactive oxygen species[J].Plant Physiology,2019,179(4):1861-1875. |
41 | XING L P, QIAN C, CAO A Z,et al.The Hv-SGT1 gene from Haynaldia villosa contributes to resistances towards both biotrophic and hemi-biotrophic pathogens in common wheat (Triticum aestivum L.)[J].PLoS One,2013,8(9):e72571. |
[1] | Zhanmin ZHENG, Yubing SHANG, Guangbo ZHOU, Di XIAO, Yi LIU, Xiangling YOU. Genetic Transformation and Function Analysis of PsnHB13 and PsnHB15 of Populus simonii × Populus nigra [J]. Bulletin of Botanical Research, 2023, 43(3): 340-350. |
[2] | Shixian LIAO, Yuting WANG, Liben DONG, Yongmei GU, Fenglin JIA, Tingbo JIANG, Boru ZHOU. Function Analysis of the Transcription Factor PsnbZIP1 of Populus simonii×P. nigra in Response to Salt Stress [J]. Bulletin of Botanical Research, 2023, 43(2): 288-299. |
[3] | Senyao LIU, Fenglin JIA, Qing GUO, Gaofeng FAN, Boru ZHOU, Tingbo JIANG. Response Analysis of Transcription Factor PsnbHLH162 Gene in Populus simonii × P. nigra under Salt Stress and Low Temperature Stress [J]. Bulletin of Botanical Research, 2023, 43(2): 300-310. |
[4] | Anying HUANG, Dean XIA, Yang ZHANG, Dongchen NA, Qing YAN, Zhigang WEI. Cloning and Drought Tolerance Expression Analysis of PtrWRKY51 Gene in Populus trichocarpa [J]. Bulletin of Botanical Research, 2022, 42(6): 1005-1013. |
[5] | Huafeng CHEN, Longjun DAI, Mingyang LIU, Bingbing GUO, Hong YANG, Lifeng WANG. Stress Tolerance Functional Analysis of the High Expression Heat Shock Protein HbHSP90.4 Gene from the Latex of Hevea brasiliensis [J]. Bulletin of Botanical Research, 2022, 42(6): 1023-1032. |
[6] | Denggao LI, Rui LIN, Qinghui MU, Na ZHOU, Yanru ZHANG, Wei BAI. Identification and Analysis of the Potato StCRKs Gene Family and Expression Patterns in Response to Stress Signals [J]. Bulletin of Botanical Research, 2022, 42(6): 1033-1043. |
[7] | He CHENG, Shuanghui TIAN, Yang ZHANG, Cong LIU, De’an XIA, Zhigang WEI. Genome-wide Identification and Expression Analysis of nsLTP Gene Family in Populus trichocarpa [J]. Bulletin of Botanical Research, 2022, 42(3): 412-423. |
[8] | Qian Sun, Yuhang Wu, Yaxuan Zhang, Jingdan Cao, Jingjing Shi, Chao Wang. Bioinformatic Analysis and Expression Pattern of LTP Family Genes in Populus davidiana × P. alba var. pyramidalis [J]. Bulletin of Botanical Research, 2022, 42(2): 211-223. |
[9] | Yuning Yang, Hao Dong, Shiwei Dong, Nairui Wang, Yue Song, Hanguo Zhang, Shujuan Li. Cloning and Expression Analysis of Transcription Factor LobHLH34 from Larix olgensis [J]. Bulletin of Botanical Research, 2022, 42(1): 112-120. |
[10] | Shuang Ma, Boya Wang, Ying Cao, Shanglian Hu, Zhimin Gao. Identification and Expression Analysis of Expansin Genes in Moso Bamboo (Phyllostachys edulis) [J]. Bulletin of Botanical Research, 2022, 42(1): 29-38. |
[11] | Jiaming Zhao, Erqin Fan, Yi Liu, Zhi Wang, Junhui Wang, Guanzheng Qu. Cloning and Bioinformatics Analysis of CbuATX1,CbuATX1-like and CbuATX2 Genes from Catalpa bungei [J]. Bulletin of Botanical Research, 2022, 42(1): 47-61. |
[12] | Xin-Tong JI, Lei YU, Ya-Guang ZHAN. Cloning and Expression Analysis of BRASSINAZOLE RESISTANTANT1 (BZR1) Gene from Fraxinus mandshurica [J]. Bulletin of Botanical Research, 2021, 41(5): 744-752. |
[13] | Hua-Feng CHEN, Yu-Qing TANG, Ya-Jie PAN, Xiao-Rui GUO. Progress on the Metabolic Basis and Regulation Mechanism of Fruit Flavor [J]. Bulletin of Botanical Research, 2021, 41(3): 474-480. |
[14] | Shu-Ping PENG, Cheng-Ming DONG, Yun-Hao ZHU. Cloning and Expression Analysis of Two Key Genes of Jasmonic Acid Synthesis in Response to Endophytic Infection from Rehmannia glutinosa [J]. Bulletin of Botanical Research, 2021, 41(2): 294-301. |
[15] | Xiao-Xiao WANG, Bi QIN, Yu-Shuang YANG, Qiu-Hai NIE, Ji-Chuan ZHANG, Shi-Zhong LIU. Cloning and Expression Analysis of E2 Ubiquitin-conjugating Enzyme Gene TkUBC2 in Taraxacum kok-saghyz Rodin [J]. Bulletin of Botanical Research, 2021, 41(1): 98-106. |
Viewed | ||||||
Full text |
|
|||||
Abstract |
|
|||||