Bulletin of Botanical Research ›› 2023, Vol. 43 ›› Issue (1): 59-68.doi: 10.7525/j.issn.1673-5102.2023.01.007
• Genetic and Breeding • Previous Articles Next Articles
Received:
2022-05-10
Online:
2023-01-20
Published:
2022-12-23
About author:
LI Na(1980—),female,master,associate professor,research direction is cell signal transduction.E-mail:ln877979316@hotmail.com
Supported by:
CLC Number:
Na LI, Xiaonan WANG. Screening and Phenotypic Identification of Seed Coat Pigmentation Mutants in Arabidopsis thaliana[J]. Bulletin of Botanical Research, 2023, 43(1): 59-68.
Add to citation manager EndNote|Ris|BibTeX
URL: https://bbr.nefu.edu.cn/EN/10.7525/j.issn.1673-5102.2023.01.007
Table 1
The primary mapping results of the mutant gene
位置 Position | 单交换数量 Number of single exchanges | 双交换数量 Number of double exchanges | 样品总数量 Total number of samples | 重组率 Recombination rate /% |
---|---|---|---|---|
Ⅰ号染色体上端 The upper end of chromosome Ⅰ | 23 | 10 | 45 | 58.0 |
Ⅰ号染色体中端 The middle of chromosome Ⅰ | 21 | 13 | 46 | 56.0 |
Ⅰ号染色体下端 The lower part of chromosome Ⅰ | 24 | 15 | 43 | 51.6 |
Ⅱ号染色体上端 The upper end of Chromosome Ⅱ | 23 | 14 | 42 | 51.9 |
Ⅱ号染色体中端 The middle of chromosome Ⅱ | 18 | 22 | 46 | 56.6 |
Ⅱ号染色体下端 The lower part of chromosome Ⅱ | 15 | 19 | 44 | 38.3 |
Ⅲ号染色体上端 The upper end of Chromosome Ⅲ | 21 | 13 | 42 | 50.0 |
Ⅲ号染色体中端 The middle of chromosome Ⅲ | 22 | 12 | 40 | 42.5 |
Ⅲ号染色体下端 The lower part of chromosome Ⅲ | 23 | 14 | 45 | 58.3 |
Ⅳ号染色体上端 The upper end of chromosome Ⅳ | 24 | 10 | 42 | 43.5 |
Ⅳ号染色体中端 The middle of chromosome Ⅳ | 17 | 12 | 48 | 38.3 |
Ⅳ号染色体下端 The lower part of chromosome Ⅳ | 13 | 13 | 43 | 65.0 |
Ⅴ号染色体上端 The upper end of Chromosome Ⅴ | 2 | 22 | 191 | 6.3 |
Ⅴ号染色体中端 The middle of chromosome Ⅴ | 2 | 18 | 44 | 25.0 |
Ⅴ号染色体下端 The lower part of chromosome Ⅴ | 18 | 16 | 48 | 50.0 |
Fig.2
Sequencing results of mutant gene and identification of mutated geneA.The sequencing and results of blast(With the red circle that mutations for bases);B.The sequence of normal amino acid and the mutations of amino acids of AT5G13930(With the red circle for normal amino acids,black arrow for the change of the amino acids),and Glycine(Gly,G) mutates to glutamate(Glu,E);C.The Seed Coat Pigmentation of WT,tt4-1 and pTT4::TT4-GFP tt4-1,and the mutated gene was indeed TT4
Fig.4
Expression pattern and Tissue and organ localizationof TT4 geneA.Tissue expression of TT4 gene in transgenic seedlings of Arabidopsis thaliana grown for 7 d;B-F.Tissue expression of TT4 gene in cotyledon and stem(B),root hair zone(C),root mature zone(D),root tip and meristem(E) and flower(F,G)
1 | DEBEAUJON I, PEETERS A J M, LÉON-KLOOSTERZIEL K M,et al.The TRANSPARENT TESTA12 gene of Arabidopsis encodes a multidrug secondary transporter-like protein required for flavonoid sequestration in vacuoles of the seed coat endothelium[J].The Plant Cell,2001,13(4):853-871. |
2 | DEVIC M, GUILLEMINOT J, DEBEAUJON I,et al.The BANYULS gene encodes a DFR-like protein and is a marker of early seed coat development[J].The Plant Journal,1999,19(4):387-398. |
3 | WINKEL-SHIRLEY B.Flavonoid biosynthesis.A colorful model for genetics,biochemistry,cell biology,and biotechnology[J].Plant Physiology,2001,126(2):485-493. |
4 | KADUCOVA M, MONJE-RUEDA M D, GARCIA-CALDERON M,et al.Induction of isoflavonoid biosynthesis in Lotus japonicus after UV-B irradiation[J].Journal of Plant Physiology,2019,236:88-95. |
5 | LIU W, FENG Y, YU S,et al.The flavonoid biosynthesis network in plants[J].International Journal of Molecular Sciences,2021,22(23):12824. |
6 | MOL J, GROTEWOLD E, KOES R.How genes paint flowers and seeds[J].Trends in Plant Science,1998,3(6):212-217. |
7 | WANG L X, LAM P Y, LUI A C W,et al.Flavonoids are indispensable for complete male fertility in rice[J].Journal of Experimental Botany,2020,71(16):4715-4728. |
8 | TAYLOR L P, GROTEWOLD E.Flavonoids as developmental regulators[J].Current Opinion in Plant Biology,2005,8(3):317-323. |
9 | PEER W A, MURPHY A S.Flavonoids and auxin transport:modulators or regulators? [J].Trends in Plant Science,2007,12(12):556-563. |
10 | TREUTTER D.Significance of flavonoids in plant resistance and enhancement of their biosynthesis[J].Plant Biology,2005,7(6):581-591. |
11 | WASSON A P, PELLERONE F I, MATHESIUS U.Silencing the flavonoid pathway in Medicago truncatula inhibits root nodule formation and prevents auxin transport regulation by rhizobia[J].The Plant Cell,2006,18(7):1617-1629. |
12 | LI J, OU-LEE T M, RABA R,et al. Arabidopsis flavonoid mutants are hypersensitive to UV-B irradiation[J].The Plant Cell,1993,5(2):171-179. |
13 | ZHOU Z, SCHENKE D, MIAO Y,et al.Investigation of the crosstalk between the flg22 and the UV-B-induced flavonol pathway in Arabidopsis thaliana seedlings[J].Plant Cell & Environment,2017,40(3):453-458. |
14 | NAKABAYASHI R, YONEKURA-SAKAKIBARA K, URANO K,et al.Enhancement of oxidative and drought tolerance in Arabidopsis by overaccumulation of antioxidant flavonoids[J].The Plant Journal,2014,77(3):367-379. |
15 | MORKUNAS I, WOŹNIAK A, FORMELA M,et al.Pea aphid infestation induces changes in flavonoids,antioxidative defence,soluble sugars and sugar transporter expression in leaves of pea seedlings[J].Protoplasma,2016,253(4):1063-1079. |
16 | BUER C S, MUDAY G K.The transparent testa4 mutation prevents flavonoid synthesis and alters auxin transport and the response of Arabidopsis roots to gravity and light[J].The Plant Cell,2004,16(5):1191-1205. |
17 | FILKOWSKI J, KOVALCHUK O, KOVALCHUK I.Genome stability of vtc1,tt4,and tt5 Arabidopsis thaliana mutants impaired in protection against oxidative stress[J].The Plant Journal,2004,38(1):60-69. |
18 | 李南南.拟南芥子叶白化突变体sca1的筛选及鉴定[D].开封:河南大学,2019. |
LI N N.Screening and identification of Cotyledon albino mutant sca1 in Arabidopsis [D].Kaifeng:Henan University,2019. | |
19 | 孙鹏.拟南芥黄烷酮-3-羟化酶调控非生物胁迫抗性机理研究[D].泰安:山东农业大学,2014. |
SUN P.The study of Arabidopsis flavanone-3-hydroxylase in regulating abiotic stress tolerance[D].Taian:Shandong Agricultural University,2014. | |
20 | 李东亚,梁爽,席阿利,等.拟南芥表皮毛发育突变体abt3-1的基因定位及表型分析[J].西北植物学报,2017,37(5):839-844. |
LI D Y, LIANG S, XI A L,et al.Gene mapping and phenotypic analysis of an Arabidopsis thaliana trichome developmental mutant abt3-1[J].Acta Botanica Boreali-Occidentalia Sinica,2017,37(5):839-844. | |
21 | 范雁婷,樊若楠,张辉,等.植物黄酮醇生物合成及功能研究进展[J].中国农学通报,2020,36(33):95-101. |
FAN Y T, FAN R N, ZHANG H,et al.Biosynthesis and function of flavonol in plants:a review[J].Chinese Agricultural Science Bulletin,2020,36(33):95-101. | |
22 | MARBACH I, MAYER A M.Changes in catechol oxidase and permeability to water in seed coats of Pisum elatius during seed development and maturation[J].Plant Physiology,1975,56(1):93-96. |
23 | VISHWANATH S J, KOSMA D K, PULSIFER I P,et al.Suberin-associated fatty alcohols in Arabidopsis:distributions in roots and contributions to seed coat barrier properties[J].Plant Physiology,2013,163(3):1118-1132. |
24 | CHAPMAN J M, MUDAY G K.Flavonols modulate lateral root emergence by scavenging reactive oxygen species in Arabidopsis thaliana [J].Journal of Biology Chemistry,2021,296:100222. |
25 | ZHANG C L, ZHANG Y L, HU X,et al.An apple long-chain acyl-CoA synthetase,MdLACS4,induces early flowering and enhances abiotic stress resistance in Arabidopsis [J].Plant Science,2020,297:110529. |
[1] | Zhezhe LI, Yidan ZHANG, Bo WANG, Zhenghao WANG, Lu WANG, Beibei CHENG. Changes and Influencing Factors of Anthocyanins in Hibiscus syriacus During Flowering [J]. Bulletin of Botanical Research, 2023, 43(4): 550-561. |
[2] | Mengqiao GUO, Xuanyu CHEN, Senrong HONG, Jiao LI, Jie FAN, Xinyu CHENG. The Correlation Between Leaf Phenotype Diversity and Total Flavonoids Content of Overground Part of Tetrastigma hemsleyanum Diels & Gilg [J]. Bulletin of Botanical Research, 2022, 42(5): 876-885. |
[3] | Yu-Qing TANG, Fei SUN, Hai-Long LIU, Sai GAO, Hong-Na LI, Jie ZHANG. Plant Screening in Dumping Site of Duobaoshan Copper Mine in Heilongjiang Based on AHP Method [J]. Bulletin of Botanical Research, 2021, 41(5): 700-711. |
[4] | Yong-Mei MIAO, Yuan Tong, Da Fang, Yu-Hao Wang. Effects of Rare Earth Element Lanthanum on Adventitious Buds Induction, Plantlets Growth and Synthesis of Secondary Metabolites of Dendrobium officinale [J]. Bulletin of Botanical Research, 2020, 40(6): 839-845. |
[5] | OUYANG Le-Jun, MA Ming-Sai, CHEN Zi-Luo, HUANG Jia-Ling, BU Liang-Hao, CHEN Zi-Yin, LI Li-Mei. An Efficient Gene Editing Research System of Arabidopsis [J]. Bulletin of Botanical Research, 2019, 39(6): 869-875. |
[6] | ZHAO Wei, QI Yan-Ni, ZHANG Jian-Ping, ZHAO Li, WANG Li-Min, XIE Ya-Ping, WANG Bin, ZHANG Yan-Ping. Comprehensive Evaluation for Salinity Tolerance of Flax Resources During Germination [J]. Bulletin of Botanical Research, 2019, 39(6): 955-963. |
[7] | LI Xin-Lei, WANG Jia-Tong, SUN Zhen-Yuan, WANG Jie, YIN Heng-Fu, FAN Zheng-Qi, LI Ji-Yuan. UPLC-Q-TOF-MS Analysis of Flavonoids in Flowers and Leaves of Camellia chuangtsoensis [J]. Bulletin of Botanical Research, 2019, 39(3): 365-371. |
[8] | WANG Rong, CHENG Meng-Lin, LIU Hui-Na, ZHAO Da-Qiu, TAO Jun. Effects of Melatonin on Flavonoids Content and Related Gene Expression Levels of Gardenia under Dark Conditions [J]. Bulletin of Botanical Research, 2018, 38(4): 559-567. |
[9] | ZHANG Yuan-Yuan, MENG Yong-Bin, XU Lei, JIA Nan, MENG Qing-Huan, XIANG Feng-Ying, LU Qi. Homogenate Extraction Process in Total Flavonoids from Elaeagnus angustifolia Fruit [J]. Bulletin of Botanical Research, 2018, 38(4): 625-631. |
[10] | YU Ting-Ting, NI Xiu-Zhen, GAO Li-Hong, HAN Guo-Jun, ZHU Chang-Fu, SHENG Yan-Min. Advances in Study of Dihydroflavonol 4-Reductase(DFR) Genes of Higher Plants [J]. Bulletin of Botanical Research, 2018, 38(4): 632-640. |
[11] | ZHANG Qiang, LIU Yi, WU Xiao-Min, SHU Liang-Zuo, SONG Yun-Xian, CHEN Chu, LONG Min-Hui. Preliminary Study on the Effects of Two Different Nitrogen Forms on Flavonoids Accumulation and Related Molecular Mechanism in Medicinal Plant Tetrastigma hemsleyanum [J]. Bulletin of Botanical Research, 2018, 38(3): 367-376. |
[12] | ZHANG Zi-Dong, ZHANG Yuan-Yuan, MENG Yong-Bin, XU Lei, JIA Nan, XIANG Feng-Ying, LU Qi. Flavonoids Enrichment from Elaeagnus angustifolia Fruit [J]. Bulletin of Botanical Research, 2018, 38(3): 467-474. |
[13] | ZHANG Dan, REN Jie, LIU Hong-Mei, WANG Hui-Mei. Responses of Main Secondary Metabolites and DPPH Free Radical Scavenging Activity of the Korean Pine to Drought Stress [J]. Bulletin of Botanical Research, 2016, 36(4): 542-548. |
[14] | LUO Meng, HU Jiao-Yang, SONG Zhuo-Yue, MU Fan-Song, YU Xue-Ying, QIAO Qi, RUAN Xin, YANG Xuan, ZU Yuan-Gang. Seasonal Variation of Total Flavonoids from Crataegus pinnatifida and Correlation Analysis of Climatic Factors [J]. Bulletin of Botanical Research, 2016, 36(3): 476-480. |
[15] | LIU Ju-Zhao;NIE Si-Ming*;JIANG Li-Sha;WANG Xi-Qing. Complex Network Analysis of Flavonoids Activities of Juglans mandshurica [J]. Bulletin of Botanical Research, 2015, 35(6): 957-961. |
Viewed | ||||||
Full text |
|
|||||
Abstract |
|
|||||