Spatial transcriptomics(ST) is a technique used to resolve RNA-seq data at the spatial level, thereby resolving all mRNA in a single tissue section. The orderly attachment of spatial barcoding oligo(dT) primers to the surface of microscope slides makes it possible to encode and obtain positional information during mRNA sample processing and subsequent sequencing. Compared with the traditional transcriptome technology, the spatial transcriptome technology can obtain the true gene expression characteristics of cells in the in-situ environment of tissues and the relationship with the microenvironment, and provide high-precision and high-resolution in-situ spatial information for gene expression. In recent years, the development of spatial transcriptome technology has made significant progress. The detected cell flow, the quantity and quality of transcripts are continuously improved, and spatial location information is more accurate and comprehensive. It has been studied in Arabidopsis thaliana, Oryza sativa, and Populus, etc. In this paper, the successful applications of spatial transcriptome technology in the study of plant dynamic development trajectory, the analysis of differences between different tissues and cell types, and decoding of the interaction between plants and microbial communities were described. The problems and challenges of space transcriptome sequencing technology in plant research were discussed, and the great potential of space transcriptome technology in plant research was revealed, which provided a new perspective for further research and application in related fields.