华仁杏EST-SSR标记引物设计与开发

doi:10.7525/j.issn.1673-5102.2013.04.023

植物研究 ›› 2013, Vol. 33 ›› Issue (4): 517-520.doi: 10.7525/j.issn.1673-5102.2013.04.023

• 论文 • 上一篇

华仁杏EST-SSR标记引物设计与开发

秦玥¹；傅大立^1,2*；吴硕¹；刘梦培¹；朱高浦¹；赵罕¹；马履一²

1.中国林科院经济林研究开发中心，郑州　450003；2.北京林业大学，北京　100083

收稿日期:1900-01-01 修回日期:1900-01-01 出版日期:2013-07-20 发布日期:2013-07-20
通讯作者: 傅大立
基金资助:

Design and Development for the primers of EST-SSR Marker of Armeniaca cathayana

QIN Yue;FU Da-Li;*;WU Shuo;LIU Meng-Pei;ZHU Gao-Pu;ZHAO Han;MA Lu-Yi

1.Non-timber Forestry Research and Development Center,CAF,Zhengzhou　450003；2.Beijing Forestry University,Beijing　100083

Received:1900-01-01 Revised:1900-01-01 Online:2013-07-20 Published:2013-07-20
Contact: FU Da-Li
Supported by:

摘要/Abstract

摘要： 随着生物科技的进步，ESTs（表达序列标签）已经成为开发SSR（简单重复序列）标记的重要资源。本文利用NCBI公共数据库下载蔷薇科EST序列22 458条，使用SSRHunter1.3软件进行了SSR搜索，从中获得22 527条SSR，应用Primer5.0软件设计并经由Oligo7.0软件检测，共得到61对EST-SSR引物。利用这些引物对8个华仁杏品种进行了PCR扩增及检测，得到10对能产生清晰多态性条带的EST-SSR标记，标明了10对引物的序列，为进一步开展华仁杏SSR分子标记辅助育种研究奠定了基础。

关键词: 华仁杏, EST序列（表达序列标签）, SSR（简单重复序列）分子标记

Abstract: Along with the progress of biological science, ESTs (expressed sequence tags) have become an important resource for SSR (simple sequence repeat) marker development. 22 458 ESTs of Rosaceae from the database of dbEST were screened, then using SSRHunter1.3 software, 22 527 SSRs were selected out. 61 EST-SSR primers were designed and synthesized through Primer 5.0 software. All primer pairs were designed for polymorphism analysis in 8 genotypes of Armeniaca cathayana. Ten primer pairs showed the amplification and polymorphisms, whose sequences were recorded, which would lay a technical foundation in molecular marker assisted selection breeding for A.cathayana.

Key words: Armeniaca cathayana, EST(expressed sequence tag), SSR(simple sequence repeat)

中图分类号:

S662.2

秦玥;傅大立;*;吴硕;刘梦培;朱高浦;赵罕;马履一. 华仁杏EST-SSR标记引物设计与开发[J]. 植物研究, 2013, 33(4): 517-520.

QIN Yue;FU Da-Li;*;WU Shuo;LIU Meng-Pei;ZHU Gao-Pu;ZHAO Han;MA Lu-Yi. Design and Development for the primers of EST-SSR Marker of Armeniaca cathayana[J]. Bulletin of Botanical Research, 2013, 33(4): 517-520.

华仁杏EST-SSR标记引物设计与开发

Design and Development for the primers of EST-SSR Marker of Armeniaca cathayana

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